org.wallerlab.yoink.service.processor

Class AdaptiveQMMMProcessor

java.lang.Object

org.wallerlab.yoink.service.processor.AbstractAdaptiveQMMMProcessor<java.util.List<java.io.File>,java.util.List<Job>>

org.wallerlab.yoink.service.processor.AdaptiveQMMMProcessor

All Implemented Interfaces:

org.springframework.batch.item.ItemProcessor<java.util.List<java.io.File>,java.util.List<Job>>

@Service
public class AdaptiveQMMMProcessor
extends AbstractAdaptiveQMMMProcessor<java.util.List<java.io.File>,java.util.List<Job>>

This class is to set up and execute adaptive QM/MM partitioning.

Field Summary

Fields

Modifier and Type	Field and Description
protected static org.apache.commons.logging.Log	log

Fields inherited from class org.wallerlab.yoink.service.processor.AbstractAdaptiveQMMMProcessor

adaptiveQMMMRegionizers, adaptiveQMMMSmoothnerRouter, propertyWrapper, regionizerServiceEnding, regionizerServiceStarting

Constructor Summary

Constructors

Constructor and Description
AdaptiveQMMMProcessor()

Method Summary

Modifier and Type	Method and Description
java.util.List<Job>	process(java.util.List<java.io.File> requests) read in a list of requests and execute them.

Methods inherited from class org.wallerlab.yoink.service.processor.AbstractAdaptiveQMMMProcessor

executeQMMMPartitioning, regionize

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

log

protected static final org.apache.commons.logging.Log log

Constructor Detail

AdaptiveQMMMProcessor

public AdaptiveQMMMProcessor()

Method Detail

process

public java.util.List<Job> process(java.util.List<java.io.File> requests)
                            throws java.lang.Exception

read in a list of requests and execute them.

Parameters:

requests - - a list of files

Returns:

jobs - a list of YoinkJob Job

Throws:

java.lang.Exception