org.wallerlab.yoink.molecular.data

Class JaxbFileReader

java.lang.Object

org.wallerlab.yoink.molecular.data.AbstractJaxbReader

org.wallerlab.yoink.molecular.data.JaxbFileReader

All Implemented Interfaces:

FilesReader<java.lang.Object,java.lang.String>

@Service
public class JaxbFileReader
extends AbstractJaxbReader

this class is to use JAXB to read a file.

Field Summary

Fields

Modifier and Type	Field and Description
protected java.io.File	input

Fields inherited from class org.wallerlab.yoink.molecular.data.AbstractJaxbReader

jaxbContext, jaxbUnmarshaller

Constructor Summary

Constructors

Constructor and Description
JaxbFileReader()

Method Summary

Modifier and Type	Method and Description
javax.xml.bind.JAXBElement<org.xml_cml.schema.Cml>	read(java.lang.String input, java.lang.Object jaxbObject) jaxb reader to read in an instance from a file.
protected javax.xml.bind.JAXBElement<org.xml_cml.schema.Cml>	unmarshal(java.lang.Object jaxbObject)

Methods inherited from class org.wallerlab.yoink.molecular.data.AbstractJaxbReader

init

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

input

protected java.io.File input

Constructor Detail

JaxbFileReader

public JaxbFileReader()

Method Detail

read

public javax.xml.bind.JAXBElement<org.xml_cml.schema.Cml> read(java.lang.String input,
                                                               java.lang.Object jaxbObject)

jaxb reader to read in an instance from a file.

Specified by:

read in interface FilesReader<java.lang.Object,java.lang.String>

Specified by:

read in class AbstractJaxbReader

Parameters:

input - - the file name

jaxbObject - - the instance will be read from the file

Returns:

jaxbObject - the required instance

unmarshal

protected javax.xml.bind.JAXBElement<org.xml_cml.schema.Cml> unmarshal(java.lang.Object jaxbObject)
                                                                throws javax.xml.bind.JAXBException

Specified by:

unmarshal in class AbstractJaxbReader

Throws:

javax.xml.bind.JAXBException