org.wallerlab.yoink.density.service.density

Class DensityCalculator

java.lang.Object

org.wallerlab.yoink.density.service.density.DensityCalculator

All Implemented Interfaces:

Calculator<java.lang.Double,Coord,java.util.Set<Molecule>>

@Service
public class DensityCalculator
extends java.lang.Object
implements Calculator<java.lang.Double,Coord,java.util.Set<Molecule>>

this class is to calculate the density of molecules on a point

Field Summary

Fields

Modifier and Type	Field and Description
protected static org.apache.commons.logging.Log	log

Constructor Summary

Constructors

Constructor and Description
DensityCalculator()

Method Summary

Modifier and Type	Method and Description
java.lang.Double	calculate(Coord currentCoord, java.util.Set<Molecule> molecules) calculate the density of a point from molecules.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

log

protected static final org.apache.commons.logging.Log log

Constructor Detail

DensityCalculator

public DensityCalculator()

Method Detail

calculate

public java.lang.Double calculate(Coord currentCoord,
                                  java.util.Set<Molecule> molecules)

calculate the density of a point from molecules. during density calculation, the density parameters are in the format of Vector

Specified by:

calculate in interface Calculator<java.lang.Double,Coord,java.util.Set<Molecule>>

Parameters:

currentCoord - -Coord

molecules - -a Set of molecules Molecule

Returns:

the density of a point from molecules