All Classes
AbstractAdaptiveQMMMProcessor
AbstractClusteringProcessor
AbstractJaxbReader
AbstractJaxbWriter
AbstractJobBuilder
AdaptiveConfig
AdaptiveProcessor
AdaptiveQMMMJob
AdaptiveQMMMProcessor
AdaptiveQMMMSmoothnerRouter
AdaptiveRegionizer
Assigner
Atom
AtomDensityCalculator
AtomicDensityPropertiesCalculator
AtomicDensityRatioCalculator
BatchConfig
BrooksSmoothFunction
BufferAdaptiveProcessor
BufferRegionizer
BuloSmoothFunction
Calculator
CenterOfMassComputer
ClosestDistanceToMoleculeCalculator
Clustering
CmlFileResponseWriter
CmlFilesRequest
CmlFilesResponse
CommonsMatrix
CommonsVector3D
Computer
ConfigurationAdaptiveProcessor
Constants
Converter
Converter.UnitConverterType
Coord
CoordInCubeCalculator
Cube
CubeBuilder
CubeBuilderImpl
CubePartitioner
DASWeightFactors
DatabaseService
DensityBasedRegionizer
DensityCalculator
DensityConfig
DensityOverlapRegionsIndicatorComputer
DensityOverlapRegionsIndicatorPartitioner
DensityPartitioner
DensityPoint
DensityPoint.DensityType
DensityPropertiesCalculator
DensitySmoothner
DistanceCalculator
DistanceRegionizer
DistanceSmoothner
DoriClustering
Element
ElementVector
Factory
FileAdaptiveQMMMProcessor
FileClusteringProcessor
FileInteractionSetProcessor
FilesReader
FilesWriter
FIRESAdaptiveProcessor
FIRESmoothner
GridPoint
GridPointAssigner
HOTSPOTAdaptiveProcessor
InteractionPartitioner
InteractionSet
InteractionTriple
JaxbFileReader
JaxbFileWriter
JaxbStringReader
JaxbStringWriter
JmsJobItemWriter
JmsRequestReader
Job
JobBuilder
JobFileBuilderImpl
JobJaxbBuilderImpl
JobParameter
JobStringBuilderImpl
LouvainAlgoImpl
LouvainClusteringFacade
MapDifference
MapSorter
MathConfig
Matrix
Matrix.Type
MMProcessor
MolecularConfig
MolecularDensityRatioCalculator
MolecularSystem
MolecularSystemTranslator
Molecule
MorokumaSmoothFunction
NumberRegionizer
PAPAdaptiveProcessor
ParameterRegionizer
ParameterTranslator
Partitioner
Partitioner.Type
PermutedSmoothFunction
ProcessorConfig
PropertyWrapper
QMMMProcessor
QMProcessor
RadialGrid
RadialGridReader
ReducedDensityGradientComputer
Region
Region.Name
Regionizer
RegionizerComponent
RegionizerConfig
RegionizerMath
RegionizerService
SAPWeightFactors
SCMPSmoothFunction
SCMPWeightFactors
SerialAdaptiveQMMMProcessor
SerialClusteringProcessor
SetDifference
SilvaDensityComputer
SimpleAtom
SimpleCoord
SimpleCoordFactory
SimpleCube
SimpleDensityPoint
SimpleDensityPointFactory
SimpleGridPoint
SimpleMatrixFactory
SimpleMolecularSystem
SimpleMolecule
SimpleRadialGrid
SimpleRegion
SimpleRegionFactory
SimpleVector3DFactory
SingleExponentialDecayDetectorComputer
SingleExponentialDecayDetectorPartitioner
SingleRegionizerService
SizeConsistentRegionizer
SmoothFunction
Smoothner
Smoothner.Type
SmoothnerImpl
SortedDistancesCalculator
StringAdaptiveQMMMProcessor
Subsets
Timer
Translator
TwoAtomsDistanceCalculator
TwoCoordsDistanceCalculator
Vector
Vector.Vector3DType
VoronoiCalculator
Wrapper
XSWeightFactors
Yoink